Odume et al
|
Greener Journal of Medical Sciences Vol. 11(2), pp. 122-129, 2021 ISSN: 2276-7797 Copyright ©2021, the copyright of this article is retained by the author(s) |
|
Diagnostic Accuracy of TB-LAMP for Diagnosis of Pulmonary Tuberculosis among Adult Presumptive TB in Nigeria
1Bethrand ODUME, 1Nkiru NWOKOYE, 2Ineke Spruijt, 2Andrii SLYZKYI, 3Cyril DIM, 1Ogoamaka CHUKWUOG, 1Sani USENI, 1OGBUDEBE Chidubem, 1Ikechukwu ANAEDOBE, 1Peter NWADIKE, 4Emeka ELOM, 5Debby NONGO, 5Rupert ENEOGU, 5Temitayo ODUSOTE, 5Omesalewa OYELARAN, 4Adebola LAWANSON
1KNCV Tuberculosis Foundation Nigeria;
2KNCV Tuberculosis Foundation Netherlands
3Department of Obstetrics & Gynaecology, College of Medicine, University of Nigeria, Ituku-Ozalla
4National Tuberculosis, Leprosy and Buruli ulcer Control Program, Nigeria;
5United States Agency for International Development Nigeria.
|
ARTICLE INFO |
ABSTRACT |
|
Article No.: 092921097 Type: Research |
Background: Microscopy is still used in resource-limited countries for PTB diagnosis because of the challenges associated with the GeneXpert instrument. For these settings, the WHO recommended the replacement of microscopy with TB-LAMP for PTB diagnosis in adults. Evidence supporting this recommendation shows a wide variation in quality and TB-LAMP diagnostic accuracy; thus, the need to validate the assay before its deployment in Nigeria.
Methods: A cross-sectional study of 2636 consenting eligible adult presumptive TB from health facilities in two States of Nigeria. Sputum specimens were analyzed for PTB using TB-LAMP, Ziehl-Neelsen microscopy, Xpert, and solid culture (reference standard). Sensitivity and specificity of TB-LAMP, Xpert and smear microscopy for PTB diagnosis were determined.
Results: Sensitivity and specificity of TB-LAMP for PTB diagnosis among all participants were 76.7% and 99.3% respectively (Youden Index [J] = 0.76). TB-LAMP’s PTB diagnostic accuracy was higher than microscopy (sensitivity = 54.3%, specificity = 99.8%, J = 0.54), but lower than Xpert (sensitivity = 84.5%, specificity = 99.1%). For HIV-seropositive participants, the diagnostic accuracy of TB-LAMP was similar to microscopy and Xpert (p > 0.05).
Conclusion: TB-LAMP had high accuracy for adult PTB diagnosis in Nigeria, and it can replace microscopy for PTB diagnosis in adults. |
|
Accepted: 29/09/2021 Published: 11/10/2021 |
|
|
*Corresponding Author Nkiru Nwokoye E-mail: nnwokoye@ kncvnigeria.org Phone: +23481 3650 1810 |
|
|
Keywords: National Tuberculosis; Leprosy and Buruli Ulcer Control Program; Diagnostic accuracy, AFB microscopy; Xpert MTB/RIF; Solid culture. |
|
|
|
|
Return to Content View [Full Article - PDF] |
1. World Health Organization (WHO). Global Tuberculosis Report 2019. Geneva: WHO; 2019 [cited 2021 4th May]. Available from: https://apps.who.int/iris/bitstream/handle/10665/329368/9789241565714-eng.pdf?ua=1.
2. WHO. Implementing the End TB Strategy: The Essentials. Geneva: WHO; 2015 [cited 2021 4th May]. Available from: https://www.who.int/tb/publications/2015/end_tb_essential.pdf?ua=1
3. United Nations. Transforming our World: The 2030 Agenda for Sustainable Development. New York: UN, Department of Economic and Social Affairs 2015 [cited 2021 4th May]. Available from: https://sustainabledevelopment.un.org/content/documents/21252030%20Agenda%20for%20Sustainable%20Development%20web.pdf
4. Nigeria Federal Ministry of Health (FMoH). National Tuberculosis and Leprosy Control Programme: Annual report 2019 Abuja: FMoH, 2020.
5. Gidado M, Nwokoye N, Ogbudebe C, et al. Assessment of GeneXpert MTB/RIF Performance by Type and Level of Health-Care Facilities in Nigeria. Niger Med J 2019; 60 (1): 33-39
6. WHO. Implementing Tuberculosis Diagnostics: Policy Framework. WHO, Geneva: 2015 [cited 2021 6th May]. Available from: http://apps.who.int/iris/bitstream/handle/10665/162712/9789241508612_eng.pdf?sequence=1
7. Agrawal M, Bajaj A, Bhatia V, et al. Comparative Study of GeneXpert with ZN Stain and Culture in Samples of Suspected Pulmonary Tuberculosis. J Clin Diagn Res. 2016;10(5):DC09-12.
8. WHO. The use of loop-mediated isothermal amplification (TB-LAMP) for the diagnosis of pulmonary tuberculosis: policy guidance. WHO, Geneva: 2016 [cited 2020 15th June]. Available from: https://apps.who.int/iris/handle/10665/249154
9. Shete PB, Farr K, Strnad L, et al. Diagnostic accuracy of TB-LAMP for pulmonary tuberculosis: a systematic review and meta-analysis. BMC Infect Dis 2019; 19 (1): 268
10. Nagai K, Horita N, Yamamoto M, et al. Diagnostic test accuracy of loop-mediated isothermal amplification assay for Mycobacterium tuberculosis: systematic review and meta-analysis. Sci Rep 2016; 6: 39090
11. Rakotosamimanana N, Lapierre SG, Raharimanga V, et al. Performance and impact of GeneXpert MTB/RIF® and Loopamp MTBC Detection Kit® assays on tuberculosis case detection in Madagascar. BMC Infect Dis 2019; 19 (1): 542
12. Bojang AL, Mendy FS, Tientcheu LD, et al. Comparison of TB-LAMP, GeneXpert MTB/RIF and culture for diagnosis of pulmonary tuberculosis in The Gambia. J infect 2016; 72 (3): 332-7
13. Yadav R, Sharma N, Khaneja R, et al. Evaluation of the TB-LAMP assay for the rapid diagnosis of pulmonary tuberculosis in Northern India. Int J Tuberc Lung Dis 2017; 21 (10): 1150-53
14. Gelaw B, Shiferaw Y, Alemayehu M, et al. Comparison of loop-mediated isothermal amplification assay and smear microscopy with culture for the diagnostic accuracy of tuberculosis. BMC Infect Dis 2017; 17 (1): 79
15. U.S. Agency for International Development (USAID). World TB Day 2020: USAID Establishes Two New $45 Million ‘Local Organizations Networks’ To Fight TB in Nigeria. [cited 2021 21st June]. USAID; March 24, 2020. Available from: https://www.usaid.gov/nigeria/press-releases/usaid-establishes-two-new-45-million-%E2%80%98local-organizations
16. National Bureau of Statistics. National Population Estimates [cited 2020 19th June]. Available from: https://nigerianstat.gov.ng/elibrary
17. Nigeria FMoH. National Tuberculosis, Leprosy and Buruli Ulcer Management and Control Guidelines. Abuja: FMoH 2019.
18. WHO. Consolidated guidelines on tuberculosis. Module 3: diagnosis – rapid diagnostics for tuberculosis detection. WHO, Geneva; 2020 WHO, Geneva; 2011 [cited 2021 13th May]. Available from: https://www.who.int/publications/i/item/who-consolidated-guidelines-on-tuberculosis-module-3-diagnosis---rapid-diagnostics-for-tuberculosis-detection
19. Dean AG, Sullivan KM, Soe MM. OpenEpi: Open Source Epidemiologic Statistics for Public Health, Version. www.OpenEpi.com, updated 2013/04/06.
20. National Population Commission (NPC), Nigeria and ICF. Nigeria Demographic and Health Survey 2018. NPC and ICF, Abuja, Nigeria, and Rockville, Maryland, USA; 2019
21. Dim CC. Declining uptake of HIV testing among tuberculosis patients in Enugu state of Nigeria: The need for a reappraisal of strategy. Niger J Clin Pract 2012;15:206-9.
22. McHugh ML. Interrater reliability: the kappa statistic. Biochem Med (Zagreb). 2012;22(3):276-82
23. Hawass NE. Comparing the sensitivities and specificities of two diagnostic procedures performed on the same group of patients. Br J Radiol. 1997;70(832):360-6.
24. WHO. Automated real-time nucleic acid amplification technology for rapid and simultaneous detection of tuberculosis and rifampicin resistance: Xpert MTB. WHO, Geneva; 2013 [cited 2021 21st May]. Available from: https://apps.who.int/iris/bitstream/handle/10665/112472/9789241506335_eng.pdf
25. Chihota VN, Grant AD, Fielding K, et al. Liquid vs. solid culture for tuberculosis: performance and cost in a resource-constrained setting. Int J Tuberc Lung Dis. 2010;14(8):1024-31
|
Cite this Article: Odume B, Nwokoye N, Spruijt I, Slyzkyi A, Dim C, Chukwuog O, Useni S, Ogbudebe C, Anaedobe I, Nwadike P, Elom E, Nongo D, Eneogu R, Odusote T, Oyelaran O, Lawanson A (2021). Diagnostic Accuracy of TB-LAMP for Diagnosis of Pulmonary Tuberculosis among Adult Presumptive TB in Nigeria. Greener Journal of Medical Sciences, 11(2): 122-129.
|
Call for Papers
Call for Scholarly Articles
Authors from around the world are invited to send scholary articles that suits the scope of this journal. The journal is currently open to submissions and will process and publish articles monthly in two yearly issues.
The journal is centered on quality and goes about its processes in a very timely fashion. Seasoned editors/reviewers will be consulted to review each article(s), profer quality evaluations and polish the articles with expertise before publication.
Simply send your article(s) as an e-mail attachment to manuscripts@acad.gjournals.org or manuscripts.igj@gmail.com.


